Downloads
Bin-level file format (binfiles)
Column definitions| Column | Meaning |
|---|---|
chrom | Region coordinates: Chromosome |
start | Region coordinates: Start of the bin |
end | Region coordinates: End of the bin |
cn_change | Automatically detected copy-number change |
genomic_mid | Region coordinates: Midpoint of the bin as a genome-wide coordinate |
raw_counts | Read number overlapping bin |
counts | Read number adjusted by in-silico reference |
median | Read number after median-normalization |
shrinker | Read number after adjusted with region median |
counts_smooth | Read number after smoothing window |
percentcounts | Read number as percentage of total reads |